PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41760
Common NameKK1_040123
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ZF-HD
Protein Properties Length: 302aa    MW: 32657.2 Da    PI: 9.4086
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41760genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer72.18.7e-2368119353
    ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFH 53 
                    +v+YkeClkNhAa+lGgha+DGCgEfm+s+ ++ +++++lkCaA + H  +H
  C.cajan_41760  68 AVTYKECLKNHAANLGGHALDGCGEFMQSPAATaADPTSLKCAAYQPHHRHH 119
                    689**************************999999**********9998777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257745.0E-1569111IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047707.0E-1869119IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015662.6E-2070119IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152320.74171122IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.601.3E-30166238IPR009057Homeodomain-like
SuperFamilySSF466891.79E-19167237IPR009057Homeodomain-like
TIGRFAMsTIGR015659.8E-27176233IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDITPTTTIS NTPSATKSPE NHETETPSRI NTPTPTPTPP RTATTKTLSF SNGVLKRHHH  60
HHPSIPAAVT YKECLKNHAA NLGGHALDGC GEFMQSPAAT AADPTSLKCA AYQPHHRHHP  120
PPPFHAATRS PNSASPPPIS SSYYPSAPHM LLALSAGLAA PPESTAAPSP LASHSRKRFR  180
TKFSQEQKEK MHKFAEKVGW KMQKRDEDLI HDFCNEVGVD RSVLKVWMHN NKNSLAKKDT  240
NINPINTVSI SNNDNANGSD KSFEVPTNND AVAVPEDRSQ DPTRNHRYGG ANVGANGSSS  300
SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A6e-221752341675ZF-HD homeobox family protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014496509.11e-104PREDICTED: zinc-finger homeodomain protein 9-like
SwissprotQ9LHF01e-59ZHD9_ARATH; Zinc-finger homeodomain protein 9
TrEMBLA0A151R7L20.0A0A151R7L2_CAJCA; ZF-HD homeobox protein At4g24660 family
STRINGGLYMA18G49390.12e-94(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19793188
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39760.12e-32homeobox protein 23